Bundle-NonWGSTestOrderFormUpdated-FetalScenario-Example

Example of an update to a Non-WGS test request sent to the central broker, as described in the Clinical Scenario:Fetus Management

Bundle
{
"resourceType": "Bundle",
"id": "Bundle-NonWGSTestOrderFormUpdated-FetalScenario-Example",
"type": "transaction",
"entry": [
{
"fullUrl": "http://example.org/fhir/ServiceRequest/ServiceRequest-NonWGSTestOrderFormUpdated-FetalScenario-Example",
"resourceType": "ServiceRequest",
"id": "ServiceRequest-NonWGSTestOrderFormUpdated-FetalScenario-Example",
{
"url": "https://fhir.hl7.org.uk/StructureDefinition/Extension-UKCore-Coverage",
"coding": [
{
"system": "https://fhir.hl7.org.uk/CodeSystem/UKCore-FundingCategory",
"code": "nhs-england",
"display": "NHS England"
}
]
}
}
],
"status": "active",
"intent": "order",
{
"coding": [
{
"system": "https://fhir.hl7.org.uk/CodeSystem/UKCore-GenomeSequencingCategory",
"code": "rare-disease-non-wgs",
"display": "Rare Disease - Non-WGS"
}
]
},
{
"coding": [
{
"system": "https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics",
"code": "staging-or-prognosis",
"display": "Staging or Prognosis"
}
]
}
],
"priority": "urgent",
"code": {
"coding": [
{
"system": "https://fhir.nhs.uk/CodeSystem/England-GenomicTestDirectory",
"code": "R21",
"display": "Fetal anomalies with a likely genetic cause",
"version": "7"
}
]
},
"subject": {
"reference": "Patient/Patient-FoetusOfRyanneBoulder-Example",
"system": "urn:oid:2.16.840.1.113883.2.1.3.2.4.18.24",
"value": "FT-RWT13521",
"system": "https://fhir.nhs.uk/Id/ods-organization-code",
"value": "RAX"
}
}
}
},
"authoredOn": "2023-09-25",
"reference": "PractitionerRole/PractitionerRole-LoisLaneKingstonClinicalGenetics-Example"
},
{
"reference": "Observation/Observation-HistoryOfFetalLoss-Example"
},
{
"reference": "Observation/Observation-NonConsanguinousUnion-Example"
},
{
"reference": "Observation/Observation-GenomicEthnicity-Example"
},
{
"reference": "Observation/Observation-PregnancyConfirmation-Example"
},
{
"reference": "Observation/Observation-NoTransplant-Example"
},
{
"reference": "Observation/Observation-NoFirstTrimesterFetalAnomalies-Example"
},
{
"reference": "Observation/Observation-NoSecondTrimesterFetalAnomalies-Example"
},
{
"reference": "Procedure/Procedure-InVitroFertilisation-Example"
},
{
"reference": "Specimen/Specimen-BloodEDTA-Example"
},
{
"reference": "Specimen/Specimen-RyanneBoulderSaliva-Example"
},
{
"reference": "Specimen/Specimen-RyanneBoulderPartnerSaliva-Example"
},
{
"reference": "RelatedPerson/RelatedPerson-RyanneBoulder-Example"
},
{
"reference": "Patient/Patient-RyanneBoulder-Example"
},
{
"reference": "RelatedPerson/RelatedPerson-RyanneBoulderPartner-Example"
},
{
"reference": "Patient/Patient-RyanneBoulderPartner-Example"
}
],
"note": [
{
"text": "No family history of relevant testing"
},
{
"text": "Free text for diagnosis/reason for referral, relevant information including family history, phenotypic details/ HPO Terms/ E.g. large echogenic kidneys with normal bladder"
}
]
},
"request": {
"method": "PUT",
"url": "ServiceRequest/ServiceRequest-NonWGSTestOrderForm-FetalScenario-Example"
}
},
{
"fullUrl": "http://example.org/fhir/Specimen/Specimen-RyanneBoulderParnerSaliva-Example",
"resourceType": "Specimen",
"id": "Specimen-RyanneBoulderParnerSaliva-Example",
{
"system": "https://fhir.kingstonhospital.nhs.uk//Id/specimenId",
"value": "ROA-69050-FTH-RWT13521"
}
],
"status": "available",
"type": {
"coding": [
{
"system": "http://snomed.info/sct",
"code": "119342007",
"display": "Saliva specimen"
}
]
},
"subject": {
"reference": "Patient/Patient-RyanneBoulderPartner-Example"
},
{
"description": "Container:ROA-69050-FTH-RWT13521 contains Saliva for Father"
}
],
"request": [
{
"reference": "ServiceRequest/ServiceRequest-NonWGSTestOrderForm-FetalScenario-Example"
}
]
},
"request": {
"method": "POST",
"url": "Specimen"
}
}
]
}
<Bundle xmlns="http://hl7.org/fhir">
<id value="Bundle-NonWGSTestOrderFormUpdated-FetalScenario-Example" />
<type value="transaction" />
<fullUrl value="http://example.org/fhir/ServiceRequest/ServiceRequest-NonWGSTestOrderFormUpdated-FetalScenario-Example" />
<ServiceRequest>
<id value="ServiceRequest-NonWGSTestOrderFormUpdated-FetalScenario-Example" />
<extension url="https://fhir.hl7.org.uk/StructureDefinition/Extension-UKCore-Coverage">
<system value="https://fhir.hl7.org.uk/CodeSystem/UKCore-FundingCategory" />
<code value="nhs-england" />
<display value="NHS England" />
</coding>
</valueCodeableConcept>
</extension>
<status value="active" />
<intent value="order" />
<system value="https://fhir.hl7.org.uk/CodeSystem/UKCore-GenomeSequencingCategory" />
<code value="rare-disease-non-wgs" />
<display value="Rare Disease - Non-WGS" />
</coding>
</category>
<system value="https://fhir.nhs.uk/CodeSystem/reasonfortesting-genomics" />
<code value="staging-or-prognosis" />
<display value="Staging or Prognosis" />
</coding>
</category>
<priority value="urgent" />
<system value="https://fhir.nhs.uk/CodeSystem/England-GenomicTestDirectory" />
<version value="7" />
<code value="R21" />
<display value="Fetal anomalies with a likely genetic cause" />
</coding>
</code>
<reference value="Patient/Patient-FoetusOfRyanneBoulder-Example" />
<system value="urn:oid:2.16.840.1.113883.2.1.3.2.4.18.24" />
<value value="FT-RWT13521" />
<system value="https://fhir.nhs.uk/Id/ods-organization-code" />
<value value="RAX" />
</identifier>
</assigner>
</identifier>
</subject>
<authoredOn value="2023-09-25" />
<reference value="PractitionerRole/PractitionerRole-LoisLaneKingstonClinicalGenetics-Example" />
</requester>
<reference value="Observation/Observation-HistoryOfFetalLoss-Example" />
</supportingInfo>
<reference value="Observation/Observation-NonConsanguinousUnion-Example" />
</supportingInfo>
<reference value="Observation/Observation-GenomicEthnicity-Example" />
</supportingInfo>
<reference value="Observation/Observation-PregnancyConfirmation-Example" />
</supportingInfo>
<reference value="Observation/Observation-NoTransplant-Example" />
</supportingInfo>
<reference value="Observation/Observation-NoFirstTrimesterFetalAnomalies-Example" />
</supportingInfo>
<reference value="Observation/Observation-NoSecondTrimesterFetalAnomalies-Example" />
</supportingInfo>
<reference value="Procedure/Procedure-InVitroFertilisation-Example" />
</supportingInfo>
<reference value="Specimen/Specimen-BloodEDTA-Example" />
</supportingInfo>
<reference value="Specimen/Specimen-RyanneBoulderSaliva-Example" />
</supportingInfo>
<reference value="Specimen/Specimen-RyanneBoulderPartnerSaliva-Example" />
</supportingInfo>
<reference value="RelatedPerson/RelatedPerson-RyanneBoulder-Example" />
</supportingInfo>
<reference value="Patient/Patient-RyanneBoulder-Example" />
</supportingInfo>
<reference value="RelatedPerson/RelatedPerson-RyanneBoulderPartner-Example" />
</supportingInfo>
<reference value="Patient/Patient-RyanneBoulderPartner-Example" />
</supportingInfo>
<text value="No family history of relevant testing" />
</note>
<text value="Free text for diagnosis/reason for referral, relevant information including family history, phenotypic details/ HPO Terms/ E.g. large echogenic kidneys with normal bladder" />
</note>
</ServiceRequest>
</resource>
<method value="PUT" />
<url value="ServiceRequest/ServiceRequest-NonWGSTestOrderForm-FetalScenario-Example" />
</request>
</entry>
<fullUrl value="http://example.org/fhir/Specimen/Specimen-RyanneBoulderParnerSaliva-Example" />
<Specimen>
<id value="Specimen-RyanneBoulderParnerSaliva-Example" />
<system value="https://fhir.kingstonhospital.nhs.uk//Id/specimenId" />
<value value="ROA-69050-FTH-RWT13521" />
</identifier>
<status value="available" />
<system value="http://snomed.info/sct" />
<code value="119342007" />
<display value="Saliva specimen" />
</coding>
</type>
<reference value="Patient/Patient-RyanneBoulderPartner-Example" />
</subject>
<reference value="ServiceRequest/ServiceRequest-NonWGSTestOrderForm-FetalScenario-Example" />
</request>
<description value="Container:ROA-69050-FTH-RWT13521 contains Saliva for Father" />
</container>
</Specimen>
</resource>
<method value="POST" />
<url value="Specimen" />
</request>
</entry>
</Bundle>